Translating Pre-Clinical Research to Clinical Patient Care™

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Brian Kelly


Agenda (Preliminary) - View Program

Friday, September 26

Time

Sessions

Mount Royal Kondiaronk Belvedere Challenge

Location: Salon Ville-Marie, Hotel Level

3 mile round trip run/walk. 554 ft elevation gain. Check-in at 7:00 am for water, orange juice, coffee, whole fruits, yogurts. Group photo at 7:15 then we will proceed down the elevator. Run/walk commences at 7:30 sharp.

Breakfast

Location: Salon Ville-Marie, Hotel Level

All attendees are welcome to partake of a hearty breakfast and closing seminar before departure.

Closing Breakfast Seminar : Fast Targeted Proteomics Using Computationally-Designed Peptide Capture Proteins and Multiplex Peptide Tagging

Location: Salon Ville-Marie, Hotel Level

Michael Gelb, PhD
University of Washington

Targeted proteomics using complex biological fluids usually requires enrichment of signature peptides prior to tandem mass spectrometry. Anti-peptide antibodies are useful in this context but can be difficult to obtain in a timely fashion. We have recently developed a computational design platform that yields proteins capable of binding targeted peptides with high affinity (nanomolar to picomolar range). When applied to 30 targeted peptides, high affinity binders were obtained in 28 cases. In this talk we will illustrate the method for newborn screening and diagnosis of a rare lysosomal storage disease called cystinosis. Patients with this disease are deficient in a lysosomal cystine transporter. Trypsinization of proteins extracted from a 3 mm punch of a dried blood spot are treated with the designed peptide binder. After peptide capture and release, the signature peptide for the cystine transporter is readily detected by LC-MS/MS. Most cystinosis patients show a large decrease in the abundance of this target peptide. We also developed a peptide methylation scheme whereby peptides are methylated on amino groups by treatment with formaldehyde and sodium cyanoborohydride. Using heavy isotope forms of formaldehyde, we can combine 4 patient samples into a single LC-MS/MS run and thus decrease the time per sample by 4-fold. This method can be multiplexed to measure the abundance of several proteins in a single analysis. We will show data for Wilson disease and a panel of primary immunodeficiencies.

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