Translating Pre-Clinical Research to Clinical Patient Care™

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David Herold | Brian Kelly


Agenda (Preliminary) - View Program

Thursday, October 8

Time

Sessions

Registration + Help Desk

Location: Foyer, Conference Level

Discussion Group Breakfast Service

Location: Montreal 1-3

Breakfast buffet is available for attendees participating in Discussion Sessions, including Industry Petite Suite Discussions and Academic Discussions. Prepare your breakfast plate in Montreal 1-3 and and proceed to your selected discussion breakout room, which begins promptly at 7:45 AM. Seating in all discussion rooms is first come, first served.

If you are not attending a Discussion Session, breakfast is available for purchase on the hotel level at Le Bisco.

Industry Breakfast Workshop : Phenomenex

Location: Montreal 1-3

Industry Petite Suite Focus Hours

Location: Westmount 1

Host Guidance: Attendees will pick up breakfast in Montreal 1-3.

Discussion Group : Decoding the Mobility Dimension: Advanced Data Analysis for Clinical Ion Mobility–MS Applications

Location: Westmount 6

Christopher Chouinard, PhD
Clemson University

Robin Kemperman, PhD
Children’s Hospital of Philadelphia

Summary:

Ion mobility-mass spectrometry (IM-MS) is now a ubiquitous technique in biomedical research, with nearly all major MS vendors offering one or more commercially-available IM options. Nevertheless, its transition into the “prime-time” of clinical analysis has been slowed by numerous challenges, not the least of which being difficult/cumbersome data analysis. In this workshop, we will briefly introduce the various IM techniques and their deliverables, ranging from drift/arrival time to mobility (K) and collision cross section (CCS). We will then focus on real datasets (applicable to the clinical lab) and discuss how/where ion mobility can be beneficial. Finally, we will present several “open-source” IM data processing software options and also how these and other tools could be integrated into a clinical lab data processing workflow.

Syllabus

  • Basic introduction to different IMS techniques
  • Discussion of deliverables from the IMS techniques: how they are measured/validated, what they reveal about chemistry/structure, and how they support separations
  • Demonstration of data‑processing tools for IM‑MS datasets
Objectives

  1. Understand the basic operating principles of IMS and the differences between the different techniques (e.g., drift tube, traveling wave, FAIMS/DMS, etc.)
  2. Understand the deliverables of the various techniques (drift/arrival time, compensation voltage, mobility, collision cross section, etc.)
  3. Understand the basics of an ion mobility data analysis workflow, how it can be applied to different data sets, and the benefits of incorporating IM into existing LC‑MS experiments
Discussion Group : Patient Centric Remote Sampling for Clinical Diagnostics – A 2026 Regulatory Update

Location: Outremont 1

Russell Grant, PhD
Labcorp

Numerous technologies are now commercially available that facilitate the collection of human blood samples in locations away from the clinical setting. This approach is termed patient centric sampling, or microsampling and can involve the collection of samples from a finger stick, or from elsewhere on the body. The samples can be dried or liquid and are often a smaller volume than those obtained by traditional phlebotomy.

The use of these approaches potentially enables samples to be collected from currently underserved communities (pediatric, elderly, remote areas, etc). Furthermore, the approach may enable more regular sampling of individuals to be performed and facilitates choice for the patient about how and where samples will be collected. These technologies also have the potential to overcome the discomfort, pain and fear that is encountered by many when collecting samples by traditional phlebotomy.

However, there are challenges around the regulatory status of the sampling devices and assays developed for clinical diagnostic purposes using these technologies. Following last year’s initial discussions on this topic, progress has been made. This workshop will take part in a facilitated discussion on what the regulatory challenges have been overcome and new challenges that have emerged. Different regulatory frameworks and quality systems will be discussed relative to EU (Medical Device Regulation + In Vitro Diagnostic Regulation), USA (FDA class 1 & 2 test “systems”) and Canada (Medical Device Directorate, ICH M10). Exemplars will be discussed relative to current products and workflows that have achieved regulatory approval in these jurisdictions. Participant discussion will then focus on how these barriers may be overcome and what future activities might be required to enable this.

Discussion Group : CAC Working Groups – What are they, why they matter, and how to get involved

Location: Outremont 5

Melissa Budelier, PhD
TriCore Reference Laboratories

Summary

In 2026 the MSACL Compliance and Accreditation Committee is forming several new Working Groups (WG) to help clinical mass spectrometry laboratories tackle compliance, quality and training challenges. These groups focus on creating practical resources to support accreditation, regulatory compliance, quality management, and workforce development. We’re gathering input from the MSACL community to identify gaps and prioritize projects. Future outcomes from these workgroups may include but are not limited to continuing education sessions; white papers; position statements; publications; templates for quality and compliance procedures, policies, and job aids; quality management software discussions; implementation and accreditation case histories.

The session will include a brief presentation, followed by Q&A and discussion. Topics to be covered include:

  • Update and overview of each CAC workgroup
  • Current WG membership, expectations for members, and how to get involved
  • Projects in progress in 2026
  • Projects planned for late 2026 and 2027
  • Wish list for programs and materials from attendees – where are the gaps?
Discussion Group : Lowering the Threshold for MS-based Spatial-omics on FFPE Tissue Sections Aligned with Pathology’s Daily Practice : What to Expect?

Location: Outremont 6

Prof Peter Verhaert, PhD
ProteoFormiX

Discussion Topics:

  • Brief review of different flavours of mass spectrometry based spatial –omics of FFPE samples
  • Principle of direct (‘top-down’) spatial MS analysis with ambient MS (MALDI and DESI)
  • Different HR MS analyzers coupled to atmospheric pressure ion sources: from TOFs to FT instruments
  • FFPE
    • chemistry of formaldehyde fixation
    • physics of paraffin embedding
    • comparison with cryo
  • FFPE sample origin (Homo sapiens), circumvention animal model species, ethical considerations
  • Further processing options of FFPE samples for MSI (“MSHC”) tailored to (bio)molecules to be detected
    • proteomics (peptidomics)
    • metabolomics
    • lipidomics
  • Dataset examples
    • Data structure from MSI dataset
    • Mass spectra: peak resolution and mass accuracy
    • Profile and centroid mass spectrum
    • Pre-processing : peak picking (untargeted or targeted approach) and peak aligment in MSI
    • Normalization: TIC vs RMS
    • Ion image : heat map color codes and color code scale bar
    • Multivariate analysis: spatial clustering and spatial PCA
    • Region of interest and get mean intensities values for downstream analysis
    • from histological annotations to mean spectrum: use of imaging data for downstream analysis in a clinical context
  • More advanced MSHC approaches: tandem MSI, ion mobility MSI,...
  • Future (and today’s) developments: Mining rich pathology archives (well-documented FFPE tissue biobank)
  • Conclusion: Advantages / Disadvantages; Limits / Potential
Discussion Group : Challenges and Considerations of TDM for mAbs (Monoclonal Antibodies)

Location: Outremont 7

Paul Jannetto, Ph.D., DABCC, FADLM, M.T.(ASCP)
Mayo Clinic

Summary

Unlike small drug molecules, the monoclonal antibody therapies often lack a well-defined maximum tolerated dose, have delayed pharmacodynamic responses, and cause the formation of anti-drug antibodies. Despite these challenges, TDM has shown clinical benefits for tyrosine kinases inhibitors suggesting the potential in Oncology. This session will discuss the challenges and considerations of using mass spectrometry to measure concentrations of programmed cell death protein 1 (PD1) inhibitors (e.g. Pembrolizumab, Nivolumab, etc.), a class of immunotherapy drugs that have revolutionized the treatment of various malignancies, to minimize toxicity and maximize efficacy.

Intermission

Location: Foyer, Conference Level

Coffee available in Montreal 1-3.

Scientific Session 3
Practical Training

Location: Salon Bonaventure, Hotel Level

Scientific Session 3
Keynote : Proteomics - Emerging Technology

Location: Montreal 4

Scientific Session 3
Spatialomics Metabolism

Location: Montreal 5

Scientific Session 3
Clinical Microbiology Applications

Location: Montreal 6

Scientific Session 3
DBS Analysis

Location: Montreal 7-8

Exhibits Open

Location: St Laurent (Exhibits)

Poster Session #3 - Thu Odd

Location: St Laurent (Exhibits)

All Thursday Odd-numbered posters will be attended during this poster session (#3).

Poster Tour #2

Location: St Laurent (Exhibits)

Early Career and first time attendees are encouraged to meet at the MSACL registration desk at 5 minutes prior to join a POSTER TOUR with a guiding mentor. Poster Tour Overview

Plenary Lecture

Location: Montreal 4-5

Lunch & Exhibits

Location: St Laurent (Exhibits)

Lunch hosted by MSACL.

If joining an Industry Petite Suite Workshop pick up your lunch in the Exhibit Hall.

Alternatively, skip the Exhibit Hall lunch lines and join the Industry Workshop in Montreal 1-3 where a box lunch will be available.

Industry Lunch Workshop : Referenzinstitut für Bioanalytik

Location: Montreal 1-3

Industry Petite Suite Focus Hours

Location: Outremont 7

Host Guidance: Attendees will pick up lunch in Exhibit Hall. Plan for a 30-minute speaker/discussion from 12:30-13:00. Allow attendees time to get to their next session at 13:15.

Scientific Session 4
Practical Training

Location: Salon Bonaventure, Hotel Level

Scientific Session 4
Data Science: Fresh Approaches with Modern Tools

Location: Montreal 4

Scientific Session 4
Metabolomics and NBS

Location: Montreal 5

Scientific Session 4
New Tools to Interrogate Microbial Metabolism

Location: Montreal 6

Scientific Session 4
Spatialomics Methods

Location: Montreal 7-8

Poster Session #4 - Thu Even

Location: St Laurent (Exhibits)

All Thursday Even-numbered posters will be attended during this poster session (#4).

Exhibitor Feedback Meeting

Location: Westmount 6

Exhibitors are invited to join MSACL Admin to provide feedback on MSACL 2026 and begin planning for MSACL 2027 in Montreal (September 26 - October 1, 2027).

Scientific Session 5
Practical Training

Location: Salon Bonaventure, Hotel Level

Scientific Session 5
Metabolomics - Breath analysis

Location: Montreal 4

Scientific Session 5
Toxicology

Location: Montreal 5

Scientific Session 5
Spatialomics Data Integration

Location: Montreal 6

Scientific Session 5
Proteomics - Other

Location: Montreal 7-8

Tea Break

Location: St Laurent (Exhibits)

ALL POSTERS TO BE REMOVED DURING THIS BREAK.

Exhibits Close

Location: St Laurent (Exhibits)

Booth STAFF : Please follow this timetable to avoid disruptions to scientific sessions.

17:00 - 23:00 Breakdown
17:05 - 17:55 Box Move-In Priority LARGE (via Reception ONLY)
17:55 - 18:45 Box Transit PROHIBITED
18:45 - 23:00 SMALL-MID Box Move-In/Out (via Admin Hall ONLY)
21:00 - 23:00 LARGE Box Move-In/Out
Scientific Session 6
Practical Training

Location: Salon Bonaventure, Hotel Level

Scientific Session 6
Lipidomics

Location: Montreal 5

Scientific Session 6
Data Science: From Instrument to EMR

Location: Montreal 6

Scientific Session 6
Proteomics - Spatial

Location: Montreal 7-8

Team Trivia Dinner with Poster Awards

Location: Montreal 1-4

All MSACL attendees are invited to this interactive, celebratory dinner.

There is no additional sign‑up or fee required; however, seating is first-come, first-served.

Form a team with your tablemates and test your esoteric knowledge in a classic pub-style trivia game!

If you prefer to dine off‑site, you are welcome to enjoy a drink in the foyer before meeting up with your dinner group and heading out.

MSACL Networking Lounge

Location: Salon Bonaventure, Hotel Level

All attendees are welcome to close out the evening in Salon Bonaventure. MSACL will host snacks and drinks (drinks require tokens - pick up tokens at the door or from MSACL Staff). Drinks will be available through 11:30pm.

The Lounge includes a pleasant outdoor patio along a stream and among trees and shrubbery, which may be enjoyable should we have nice weather.

Must be wearing your badge to attend.

Prepare for karaoke!

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